Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAACASKLTPCFPFLNNATA---Q---PTADCCNPIKDTVANDLECLCNLYNDP--NLL---SSLN-----ITVAAALRISRECGVTTDLSACNV
1HSS Chain:A ((15-103))
-----PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPI-------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34765 for 429 contacts (-81.0/contact) +
2D Compatibility (PS) -6203 + (NN) 1917 + (LL) 1248
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -42803.0 ( -99.77 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: