Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTICNMPASGLMACKPAVT----PPNPPP----PTSTCCSALSQADMRCLCSYKNSQLLP--------------SL-G----I--DPNLAMKLPSMCKLPHPANC
1B1U Chain:A ((11-109))
----AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH--
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25152 for 448 contacts (-56.1/contact) +
2D Compatibility (PS) -7211 + (NN) -5042 + (LL) 408
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -40497.0 ( -90.40 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: