Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKSSPDNEAIKLAPCAEAAQDQN----AA-----VSASCCDQVRKIGRSPSCLCAVMLSNTAK---A---------SG--------IKPEIAITI--PKRCNIANRPVGYKCGPYTLP
1BEA Chain:A ((16-109))
--------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26697 for 406 contacts (-65.8/contact) +
2D Compatibility (PS) -6462 + (NN) -850 + (LL) 12
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -38997.0 ( -96.05 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: