Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSDCQNDIQMLETTCYKYVAKDAPTSPPSQECCDTMNGVDVPCVCSYLGAPGIKENI----S---------MEKVFYVAQQCGVSI-PGNCGGSKRA
1HSS Chain:A ((37-106))
---------------------------VLRDCCQQLAHISEWCRCGAL-YSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD--------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38402 for 244 contacts (-157.4/contact) +
2D Compatibility (PS) -4859 + (NN) -522 + (LL) 916
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -45617.0 ( -186.95 by residue)
QMean score : 0.309
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: