Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------MMVAAQCDAGQLVVCAPAILGGAMP----------TASCCSKLRE------QEQQG------CFCEYLRNP----AYAGYINSQTARGAIAACNVTLPQCS |
1ATG Chain:? ((1-231)) | ELKVVTATNFLGTLEQLAGQFAKQTGHAVVISSGSSGPVYAQIVNGAPYNVFFSADEKSPEKLDNQGFALPGSRFTYAIGKLVLWSAKPGLVDNQGKVLAGNGWRHIAISNPQIAPYGLAGTQVLTHLGLLDKLTAQERIVEAN-SVGQA---HSQTASGAADLGFVALAQIIQAA--AKIPGSHWFPPANYYEPIVQQAVITKSTAEKANAEQFMSWMKGPKAVAIIKAAGYVLPQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ATG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15178 for 250 contacts (-60.7/contact) +
2D Compatibility (PS) -7109 + (NN) -714 + (LL) 636
1D Compatibility (HY) -800 + (ID) 700
Total energy: -23865.0 ( -95.46 by residue)
QMean score : 0.340
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