Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQSCSDWTQL-LDCQNAASDPSATPSGECCNRIRQYQNAP------DCLCTMLLAARNAAQSTGLPFNLQAALSIPAKCHVQVPSGYSCAGIPIPSS--
1FK5 Chain:A ((1-93))
-AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAA----GVSGLNAGNAASIPSKCGVSIP--YTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31547 for 573 contacts (-55.1/contact) +
2D Compatibility (PS) -9107 + (NN) -8982 + (LL) 300
1D Compatibility (HY) -2800 + (ID) 1250
Total energy: -53386.0 ( -93.17 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: