Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------ACDATNNMG------KLLPCRQAAVK-NGKDPKQLAGCCDAVKPFSGSKDAADCL---CQSLLAAQKVDKTVDLHSAIAIPAKCGIPVQANLKCNGMAVPQH-------------------------------------------------------------------------------------- |
| 1RKU Chain:A ((1-206)) | DMEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFS-QPLM----RQLGFP---TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2091 for 448 contacts (4.7/contact) +
2D Compatibility (PS) -8779 + (NN) -98 + (LL) 792
1D Compatibility (HY) -6000 + (ID) 650
Total energy: -12644.0 ( -28.22 by residue)
QMean score : 0.396
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