Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQLPQGCGPKLG--VLLPCLPFLQGQGS----------NP-----------TQPCCNGLETVVKLNPACLCALVNSQ---------LGN---RINITLALSLPSLCNLAGVTIDLCNPTGKFSFKI
1PSY Chain:A ((16-116))
----QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV------------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43909 for 431 contacts (-101.9/contact) +
2D Compatibility (PS) -6913 + (NN) -2821 + (LL) 1512
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -55831.0 ( -129.54 by residue)
QMean score : 0.249
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: