Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DYCDLTTLLPCLSSVIGD-KPT--------PP-----------SEECCAVVRVVDPDCVCGHVGDDEGIT----G-------INVKLAAQIPKKCGRHVPKGFKCGEH
1PSY Chain:A ((26-116))
------DLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV-----------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23996 for 401 contacts (-59.8/contact) +
2D Compatibility (PS) -6402 + (NN) -5174 + (LL) 440
1D Compatibility (HY) -800 + (ID) 650
Total energy: -36582.0 ( -91.23 by residue)
QMean score : 0.197
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: