Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCSNNYSALLPCAAATRSAT-----AT----PSGACCKVVEGFKSNPACLCSTIAAA---KA-----------AGY-S----I-N-EHNAESIPTRCKLHGYTSCSKKN
1B1U Chain:A ((16-108))
--------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI-------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28821 for 401 contacts (-71.9/contact) +
2D Compatibility (PS) -6468 + (NN) -131 + (LL) 264
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -39656.0 ( -98.89 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: