Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATVPCGTVDMKAAACVGYAT----GKQPKP-----SPACCSGLQQLAATVKTVDDKKNICRCLKNGVKAFA-------G---VQ----------DRLLSQI--PTACNIKVGFPVSLNTNCET
1BEA Chain:A ((16-110))
----------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS----------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35414 for 389 contacts (-91.0/contact) +
2D Compatibility (PS) -6490 + (NN) -3147 + (LL) 1576
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -46875.0 ( -120.50 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: