Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVTCSQVTQLLNPCVNYLIY---GGA----IPSSCCAGVKQVKAASKTGEDRRTACSCIQDGAAMIP-------G----IDYNLVASLPSQCGVSLPYKISPSTDCSRIN
1HSS Chain:A ((15-103))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPI--------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57877 for 394 contacts (-146.9/contact) +
2D Compatibility (PS) -6033 + (NN) 2027 + (LL) 1172
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -65211.0 ( -165.51 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: