Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTTVLIGMAPCLNYITGSSS--SP-------SSSCCSQLASVVQSQPRCLCVALN---GGGA-A-----------L-G--ITI--NRTLALALPGACNVQTPPVSQCDAA
1B1U Chain:A ((16-109))
---------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH-------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47277 for 390 contacts (-121.2/contact) +
2D Compatibility (PS) -6403 + (NN) -1170 + (LL) 1488
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -58212.0 ( -149.26 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: