Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------VTCSPTELSSCVGAITSSTPP-----SKLCCSKIKEQKPCLCQYLKNPNLK-----KFVNSPNARKVASTCGTPIPKC------------------------------------------------------ |
1KNG Chain:A ((50-193)) | RPAPQTALPPLEGLQADNVQVPGLDPAAFKG-KVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6704 for 357 contacts (-18.8/contact) +
2D Compatibility (PS) -6929 + (NN) 252 + (LL) 52
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -16229.0 ( -45.46 by residue)
QMean score : 0.379
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