Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GPYCRDVVETILPCIEYITTPGASTLPAPCCNGMKSLNGEPQYVCRCLKETFFVL----PGLN-----LAALAALPKNCGVNLPYQITPDMNCDKVN
3OB4 Chain:A ((427-485))
-------------------------HQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18848 for 265 contacts (-71.1/contact) +
2D Compatibility (PS) -5173 + (NN) -2888 + (LL) 1796
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -27713.0 ( -104.58 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: