Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDPKCKNVAESIIPCVEYIMTP--DASN---PPAPCCNGMTSLAGQVQALPERQFACRCIKDGIFDLP-------D----LNLAALAALPNNCGVDLRFQITPDMDCDNLN
1HSS Chain:A ((15-105))
----------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVV------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52448 for 433 contacts (-121.1/contact) +
2D Compatibility (PS) -6509 + (NN) 1751 + (LL) 880
1D Compatibility (HY) -4800 + (ID) 300
Total energy: -61426.0 ( -141.86 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: