Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSCPEVQQTLAPCVPYVTHP---G--PPIS----------PPPPCCNAVKTLNGQSKTTQDRRDVCGCLKSMMGGIP----GLNL-----PAIASLPKDCGVDIG--YIISPNMDCNKVN
1W2Q Chain:A ((23-121))
--------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME------NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDV--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43436 for 428 contacts (-101.5/contact) +
2D Compatibility (PS) -7067 + (NN) 2694 + (LL) 600
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -52259.0 ( -122.10 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: