Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YCKESLHLCMQHLKLNDRPTWLKCCDRLIIPGPCMCKYIKDPVQWKEAYRLMASCGKTVPLNQSLKSYFKCG
4C1L Chain:A ((24-53))
--------------------------FTIIAGPCS---IESRDQIMKVAEFLAEVGIKV-------------
General information:
TITO was launched using:
RESULT:
Template:
4C1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1558 for 134 contacts (-11.6/contact) +
2D Compatibility (PS) -3211 + (NN) -1832 + (LL) 2460
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -6641.0 ( -49.56 by residue)
QMean score : 0.242
(partial model without unconserved sides chains):
PDB file :
Tito_4C1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C1L-query.scw
PDB file :
Tito_Scwrl_4C1L.pdb
: