Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPVCPLNRSDLGICVNVLGLISLTTSNVARCCSILAGLNNTPLVSVCACEAVRLNILNLLGITVNLNLRLNGLLGLCRLPVQPGFNCLL
1N89 Chain:A ((3-65))
------QASQLAVCASAILS---GAKPSGECCGNLRAQ-----Q-GCFCQYAKDPTYG---QYIRSPHARD-TLTSCGLAVP-------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63650 for 405 contacts (-157.2/contact) +
2D Compatibility (PS) -6181 + (NN) 674 + (LL) 672
1D Compatibility (HY) 800 + (ID) 600
Total energy: -68285.0 ( -168.60 by residue)
QMean score : 0.124
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: