Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DYTRLMIQVHSYVPFCAYTYDYFSYCLDFLT----GYYYK-P----GKKCCVHIVKLNIIAKHKKENPRLLCNCVEMMTRGYTP------P---ML----------ADKIQQL--PLLCNTHLSFPISSSMDCSTV
1BEA Chain:A ((15-109))
--------------------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PA-YCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63172 for 386 contacts (-163.7/contact) +
2D Compatibility (PS) -6598 + (NN) -2164 + (LL) 2880
1D Compatibility (HY) -800 + (ID) 600
Total energy: -70454.0 ( -182.52 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: