Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSEKELVKGFFNCVSE-KKPRLISFNGRTFDIPVLKYRAM-VHDVQAEYFHKAGD------KWNSYNQRYSSNWHCDLLESLSDFGAFARVKMNEVCAV-FNLPGKIGVDGSQVVDLYDSG--RIQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK |
| 2GV9 Chain:A ((400-553)) | --------------------------------------------------------------------------------------------SEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFLLAKLTDIYKVPLDG-YGRMNGRGVFRVWD--KIKVNGMVNIDMYGIITDKIKLSSYKLNAVAEAVLK-DKKKDLSYRDIPAYYATGPAQRGVIGEYCIQDSLLVGQLFFKFLPHLELSAVARLAGINITRTIYDGQQIRVFTCLLRLADQKGFILPDTQV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25203 for 820 contacts (-30.7/contact) +
2D Compatibility (PS) -13921 + (NN) -2274 + (LL) 6748
1D Compatibility (HY) -10400 + (ID) 1300
Total energy: -46350.0 ( -56.52 by residue)
QMean score : 0.190
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