Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVWYELTLFGVLTHIISNVFFPSESDYLSTIKFLGSFAVGFGFRPLGAFIFGYIGDKYGRRKVLLTSVILVSISSTAIAVIPDFKEIGILSPILLLLCRIVQGTAAGGETSINSAFLIEHSSDKKDLGFLGSMKAFSGALGSITCFLMIAIVKKFTGENYEIWGW-----RLLFYFCSIMGVIGFLTRYIMEESLAYKTHDQNKSLSNSPFLELIRSYKKAFMI-----AIGLGIAQNAIVYSAIMFYNISVKELILSGIDIK--NVVRITVEITFGTSAVLFAILSDKVGRKNVMVLILIALACAGLPAFSLLSYDNHYIVTLTFLLISIPIGASFGIYNSLVCELLPTKVRCTGFSLAHNISAGIFGGISPSICMWLIEKTETELAAGFYLTMCALISLIYVLQIKTEDKKVDW |
| 2CY7 Chain:A ((5-377)) | ----------------------TLTYDTLRFAEF-----EDFPETSEPVWILG---RKY-------------SIFTEKDEILSDVAS--------RLWFTYRKNFPAIGGTGPTS-----------DTGW-------GCMLRCGQMIFAQALVCRHLGRD---WRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVV------MEEIRRLCRTSVPCSPWRPLVLLIPLRLGLTDI-NEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEGCFIPDESFHCQHPPCRMSIAELDP--SIAVGFFCKTEDDFNDWCQQVKKLSLLPMFELVEQQPDVLNLSLDSSDVERL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272925 for 2639 contacts (-103.4/contact) +
2D Compatibility (PS) -33271 + (NN) 4053 + (LL) 8076
1D Compatibility (HY) -8000 + (ID) 2750
Total energy: -304817.0 ( -115.50 by residue)
QMean score : 0.219
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