Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANEHLNLFSLENSDYIYADYNATFPVSDSVKESILEVLSKQVLNPSSLHRKGQEARRILQDARDNIRSAIGVPSNKEIVFTSGATEANSLVMKGIAGFQH--------VISAVEHPSIL--------NSACNPHIIPVNQGGIVDLLALERILSELKGNRVIVSVMMANNETGVVQPVKEIAEIAHKFETI----------YHTDAAQSVGKIKVNMEDLGMDLLTLSAHKFGG--IAGSGVLIFNKDLVIEPIIVGGGQEKGLRGGTENIVAIAGLSAALQSIS-NLLSKMDEIKELRDQLEYELLNLASGIKIFGKNSK-----RLPNTSLIYMPGVKSDVQLMNFDLNNIAVSNGSACSSGKVE-PSHVLLAMGATREQAECSIRVSIGPQTKPRDIRKIVDCWYNIYEKNILDMRK |
3A9Y Chain:B ((20-418)) | ----------------VYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIG-GKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSK--VNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLE-ERLEAEFGKRIH-LNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGPV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135989 for 3080 contacts (-44.2/contact) +
2D Compatibility (PS) -38494 + (NN) -16932 + (LL) 732
1D Compatibility (HY) -21600 + (ID) 6400
Total energy: -218683.0 ( -71.00 by residue)
QMean score : 0.441
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