Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDNHFMSIALSLAEKTLGNVAPNPAVGCIIVKDGVVVGEGHTGIGGRPHAEVAALQSAKGSTHGATMYVTLEPCCHYGVTEPCIIEIIRSGIKKVVVAAIDPDKRVSGGGIKALEEAGITVEQGIMQEEAEKLNIGFFTTRKLHRPFIACKIATTLDGKIATFKGDSKWITSGSTRNWVHELRAKYDAIMIGSNTLINDDPLLTCRLPGLESRSPIRLIIDSQEKLKEKHNVVKTADKVT-TWVIINKKI-EKKIKNINYLIVNSNDKPIPASHTGMTSNQGEYSTDKVCLKDMALKLVSEIGITRLLVEGGRVLTTELLKHDLIDRLIICRSGKILGNDAIP-FIGNLEIQSINNCYQFKKAEIIDFDEDIVEVWDKLQ |
2B3Z Chain:D ((13-364)) | -MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKEAGIEVREGILADQAERLNEKFLHFMRTGLPYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNV-TKQPVRVILDTVLSIPEDAKVI--CDQIAPTWIFTTARADEEKKKRLSAFGVNIFT----------------LETERIQIPDV-LKILAEEGIMSVYVEGGSAVHGSFVKEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGRDIKLTAKPT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179893 for 2816 contacts (-63.9/contact) +
2D Compatibility (PS) -37938 + (NN) -14740 + (LL) 996
1D Compatibility (HY) -26800 + (ID) 6650
Total energy: -265025.0 ( -94.11 by residue)
QMean score : 0.502
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