Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVVEIVIRNSTYKISCESGKKDHLLHLANSFNKLVSSISHKTGGKGSDTLNFLLAAL--ILEDKVLELTKKLDEINQKRENYKNEKRTEYTEVLDRVNKIIECIKD--
2NSC Chain:A ((1-109))
MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGEEFQEYTLDFLMDLIPDTLKDRKLILSPIVTERELKDVTARVVVEVHEEP
General information:
TITO was launched using:
RESULT:
Template:
2NSC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6494 for 553 contacts (-11.7/contact) +
2D Compatibility (PS) -11459 + (NN) -6002 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -26705.0 ( -48.29 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_2NSC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NSC-query.scw
PDB file :
Tito_Scwrl_2NSC.pdb
: