Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILRNLLFLLPPEIAHSLAIM-----MLKRISYRKPIELPESLSVNCFNNKFRSPVGLAAGFDKNAEVIRSMLSFGFGFIEAGTVTKHPQYGNAKPRIFRLIEDQGVINRLGFNNKGIDYF-----LKQISETKL--DDCILGINIGKNSASKDQVSDYIDLIKMVYGKSSYIVLNISSPNTPNLRNLHNRQELSELLKSITLTRKSIDNSESVPIMLKISPDIDQQTKEDIAGLALEYKIDGLTISNTTVSRDN--LHSHHNESGGLSGRPLFKLSTELLSDIYKLTQGKILLIGCGGISSGADAYKKIKAGASLVQLYTALIYHGPRAVNKINLELAELVRKDGLSNIGEAVGCDCRF |
2PRL Chain:A ((13-366)) | -LMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDS----DMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -165174 for 3110 contacts (-53.1/contact) +
2D Compatibility (PS) -36890 + (NN) -19943 + (LL) 552
1D Compatibility (HY) -28400 + (ID) 7800
Total energy: -257655.0 ( -82.85 by residue)
QMean score : 0.516
|
|
|