Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MLIVPKEMRDYTIGSGRSLLDIITEY----FQELCEKSGFIKKEYRIERNVDN---TFVLDRRVNEPAVTNNRKEIS-----
4RS8 Chain:A ((1-84))
YIFLTPRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWLLAEGYVVKEQKGEEIYYKLTDKGKQMATAELEKIRKLVEVV
General information:
TITO was launched using:
RESULT:
Template:
4RS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5246 for 438 contacts (-12.0/contact) +
2D Compatibility (PS) -7245 + (NN) 338 + (LL) 0
1D Compatibility (HY) 0 + (ID) 450
Total energy: -12603.0 ( -28.77 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_4RS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RS8-query.scw
PDB file :
Tito_Scwrl_4RS8.pdb
: