Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGT-GNGPEIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGD----FLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAAIVS-LINGSHDIYIGIGG--APEGVLA-AAALSSIGGQMEGRLIFDTHQSKERAKILNIDDLEKIYSIKDMVKGESVFIATGVTSGELVDGVKFGYNICSTSSLIMLHNKVIKLQTIQNLC |
| 1VDW Chain:A ((43-217)) | ---------------------------TKVVDKVAENIIISKFKD---LGVNVVSE-------------EIGRIDQGSDYTVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYEP--IVERLYEGIPGK-GS-------YLNGEKIKVRELAEK--PSISFYTKGKGT----KIID--KVKRTRTLGAIALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEITFSATEKVNIIAANNEELLETILRSIEK-------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54463 for 1257 contacts (-43.3/contact) +
2D Compatibility (PS) -18278 + (NN) -9481 + (LL) 8308
1D Compatibility (HY) -2800 + (ID) 1750
Total energy: -78464.0 ( -62.42 by residue)
QMean score : 0.413
|
|
|