Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MFIGNRNRNKVERAISEIRRGLPIIIYDKSNYLLVAAAETLEKDLFNQYGLISGKIYVILPSSKVTCISQNVEHSSKRLLINNFD---ELFHLVNCSKEDHTKELQRSKAIDECAITLLKSSELLPYAL------VVDVNFKDEYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKTPLFLKQTQKVNIISYRTCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDD-ERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF---- |
| 3G8Q Chain:A ((1-278)) | MKVSLAGQTVD-VKKILNEIPK--------------------------------RTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTARPCLYCARELAEAGV--AGVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGY------DPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRG--------------FDADIAPAPENLSG---RVEIMVTRGD------------PDEAVELLKEELPVF---------------RIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARA-------------GAFSSSREAEVFIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66913 for 2123 contacts (-31.5/contact) +
2D Compatibility (PS) -28411 + (NN) -8982 + (LL) 6316
1D Compatibility (HY) -10800 + (ID) 2350
Total energy: -111140.0 ( -52.35 by residue)
QMean score : 0.262
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