Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGI---PNKLDPHEPENLAKAIKKL-NLKYVVITSVDRDDLPDGGASQFIKCIEEIRKITPETTVEILTPDF--------LNKKGAFEAIAVASPDVYNHNIEMVPRLYARIRPRARYFHSLYLLKMVKQINPKLLTKSGL--MVGLGETKEEVLQVMDDLRSAEVDFITIGQYLQ-PTPKHAKIDRYVTPEEFEHYKYIAYSKGFLVVASSPLTRSSYHAEEDFNRLKACR |
| 2A5H Chain:A ((116-298)) | --------------------------------------------------RVLLLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSD---ETLEYIIAKLREI--P-HVEIVRIGSRTPVVLPQRITPELVNMLKKYHPVWLNTHFNHPNEI---------TEESTRACQLLAD--AGVPLGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHTSGYCVPTFVVDAPGGGGKTPVMPNYVISQSH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71855 for 1211 contacts (-59.3/contact) +
2D Compatibility (PS) -18010 + (NN) -6528 + (LL) 3560
1D Compatibility (HY) -7600 + (ID) 1050
Total energy: -101483.0 ( -83.80 by residue)
QMean score : 0.418
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