Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAVVKELAHPLFSAAGIDDNWIRVFIINDNSINAFVINNNSIFIHLGLLQYSTEPYALLSILAHEIAHISAGHISQMSSAVGYFQSIAIVSYMVGLISTIIINPQIASAILLSGMTLSSRLFFNYSQEQESVADSYALKYLDESGYDNLGMKEVFDYFRGIEHENAEGYFRTHPLSSKRIFAVQNYKVKNEVKPILVDKLLRFKRMVAKLDSFFSPIHVLSNKYEDNSEYVSAVIYYRQGKIKKAIAKVNSLIQESSNDPYLYELKAEMLYKTGNLNEAVKMYEESLKYLSEKNSYLVKLALSHALLLYGDIKKAIFHLEQIVSVEPNNAFVWKHLGIAYKCDANIAMHYFALTKKACIEGNLKQFVKYAELAVRNLPKDSPYLLQIEDMKRFNE |
| 1FCH Chain:A ((46-368)) | SATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGD----LPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENE-----QELLAISALRRCLEL------------KPDNQTALMALAVSFTNES--LQRQACEILRDWLRYTPAYAHLVTRIL-----------------------------------------------GSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALEL--QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSG------------GAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGLPQ---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94151 for 2595 contacts (-36.3/contact) +
2D Compatibility (PS) -32312 + (NN) -16099 + (LL) 8244
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -142118.0 ( -54.77 by residue)
QMean score : 0.389
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