Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSISLSVLDDSVLIKPINEEKQ--GGIVLPSSAEKKPTKGEVIAIGEGSRNSSGE-RIALTVKAGDKVFYRQWAGTEIEHGSEKLIVMKESDILAIIK
1P3H Chain:E ((2-97))
--KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS
General information:
TITO was launched using:
RESULT:
Template:
1P3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20867 for 580 contacts (-36.0/contact) +
2D Compatibility (PS) -9842 + (NN) 2022 + (LL) 180
1D Compatibility (HY) -10400 + (ID) 1650
Total energy: -40557.0 ( -69.93 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_1P3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P3H-query.scw
PDB file :
Tito_Scwrl_1P3H.pdb
: