Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSEV---GAGTL-----HPA------------TIM---------SAID--VKPTKIAYLQPVVRPADGRYGDNPNRLYQHHQYQVII--KP-SGNNLQDVYLSSLRALGISTEKYDIKFIED--DWENPSVGASGLGWEVTCNG---MEVTQLTYIQ-QIG-SINCRII---PGEVAYGLERLAMCIQGVNNVYDIIWNDNGITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
| 3PCO Chain:A ((110-315)) | ---TRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQ-----THTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDL--QIRFRPSYFPFTEP-----SAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87539 for 1134 contacts (-77.2/contact) +
2D Compatibility (PS) -17159 + (NN) -2036 + (LL) 7280
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -109554.0 ( -96.61 by residue)
QMean score : 0.266
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