Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKYKNIGYVASESPKSQEVSKLLQKLNFINITEENKSEVDLLVVVGGDGLMLHTLHNYVVGNKDIHVYGVNTGSVGFLMNKYFSSSEDLIDNIEHATSAQLTLLKMEAIDLSG---KKYHHVAVNEVYVFRK-ANQIVEMNVAINSKLKMEKFRGDGIILSTPTGSTAYNFSAGGPILPLNSNLFALTSINSYYPRHWNGALISNDTIVQIDINNAQ-----NRPALVVSDYKE---LHNISQIKMQKDHENTVTLLFDKDYSLDERIFDRQFLY |
| 3AFO Chain:A ((112-320)) | ------------------------------------VNRTDLLVTLGGDGTILHGVSMFGN-TQVPPVLAFALGTLGFLSPFDFKEHKKVFQEVISSRAKCLHRTRLECHLKKKDSNSSIVTHAMNDIFLHRGNSPHLTNLDIFIDG-EFLTRTTADGVALATPTGSTAYSLSAGGSIVSPLVPAILMTPICPRSLS-FRPLILPHSSHIRIKIGSKLNQKPVNSVVKLSVDGIPQQDLDVGDEIYVINEVGTIYIDGTKRSGIYCVAKTENDWIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109947 for 1519 contacts (-72.4/contact) +
2D Compatibility (PS) -21653 + (NN) -6716 + (LL) 2456
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -146960.0 ( -96.75 by residue)
QMean score : 0.320
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