Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISKFVFLFLFCLGFNLQASGTLNIEEVITRKGFKFLFVENCDLPKVSLNISFKDAGYAYENVEKQGLTWFTSLAIQEGAGKNDA-KDFAKKLEDKGISLNFIAGLEAFRASLNTLSENLEEAVSLLSDAIMHPKVDLEGLNRAFEKAKVNFNNLEKDPYFIAGKELNTLLFKKHPYSKSEYGILDTIMS------I-TRDDVLAYVKRNFTKDNIVISVVGCTTKEEVSALLDKYLSKLPLKRSKVRKIPVKN-NFG-PAESKNIFMDIPQSVIFFAQKGIAYE-DPDYYSASVLINALGGMGLNSILMKELRQNLGITYGVFAHIIPN-KHGNAIVGNMSTDSST---AGKAILAVKDTLSRIKREGIDEQLFKDAKTILVNNLTF-FLSNNTNTAMLLDDMQINDRDVNRINNYADIINDVKLEKVNELASSLLDPENLFFVKVGRNT |
| 3CWW Chain:A ((30-455)) | --------------------EDKREYRGLELANGIKVLLISDPTTDKSSAALDVH-IGSLSDPPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSAYYSSNLMAVVVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGH-EGPGSLLSELKS-KGWVNTLVGGQKAGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHY-YPLEEVLTAEYLLEEFRPDLIEMVLDK-LRPENVRVAIVSKSF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CWW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126433 for 3334 contacts (-37.9/contact) +
2D Compatibility (PS) -44479 + (NN) -23652 + (LL) 2288
1D Compatibility (HY) -8000 + (ID) 3000
Total energy: -203276.0 ( -60.97 by residue)
QMean score : 0.432
|
|
|