Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISKEDLLELMKIRHSRRSYGQSKLAHQEEINMLIETAWLSPSRYGDEPWRQVICNRQSNQDAWEKLLSCPTEPNQKWAKDTQILIISLSTKNFHD--H------------TKIVNFWGSHDTGIANYTFMLQSYIYEFNAHQMSRF--DRNKIVKNSIYQMILI
1ZCH Chain:A ((1-149))
---MNEVIKSLTDHRSIRSYTD-EPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDK---ERKKKISELA--GGQPWIDQAPVFLLFCADFNRAKIALEDLHDFKMEITNGLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELIELLELPKYVF
General information:
TITO was launched using:
RESULT:
Template:
1ZCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26154 for 887 contacts (-29.5/contact) +
2D Compatibility (PS) -14339 + (NN) -8907 + (LL) 524
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -53876.0 ( -60.74 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_1ZCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZCH-query.scw
PDB file :
Tito_Scwrl_1ZCH.pdb
: