Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNSN--TA---------------------------------------EKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLGIDTPKGYIISRGDILK-----NNIKIDYPYVLKPINEGSSIGVHITFSHEDYLKLKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDEA---AGTMEIRPKNKFYDYKAKYTNGFAEHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
3TQT Chain:A ((2-358)) | -------------AEKLHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLISVIFIDHVGRWYLIDQPEMFLAHSPDHLVKEGSARPITIAFGDAAKPWQSL---RRYSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDWHTLSPRDATEGVYQRLLDRW--ELFVKAVSLGSSVATLPVKTETEFTKAVKE----------------VFRYDDRLMVEPRIRGREIECAVLGNGAPKASLPGEIIPH--------------ATTTTSVDLSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTP-NNKVLVNEINTIPGFTNISMYPKMWE-ASGLPCPNLLDQLIELAIDRHQEQQKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125609 for 2409 contacts (-52.1/contact) +
2D Compatibility (PS) -31531 + (NN) -17924 + (LL) 4108
1D Compatibility (HY) -12800 + (ID) 4050
Total energy: -187806.0 ( -77.96 by residue)
QMean score : 0.424
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