Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------MVENNDDNLFIKRFANRTSSSI--GGSFSSKYSSQNTKARALEERGKISQ------LASKKTEPKEAFSESGSIKGKSRTVNERSFADATRRSRSDLIYLVRGKDRGRSAWHYVLVDKDKREMFLAKSRTGSMDVADYGEVLYSGWGEDPSQEIVDKINEEFGI- |
1JWQ Chain:A ((1-179)) | MKVVVIDAGHGAKDSGAVGISRKNYEKTFNLAMALKVESILKQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANS----SGSSASNGTETYYQRSASKAFANVMHKYFAPATGLTDRGIRYGNFHVIRETTMPAVLLEVGYLS-NAKEEATLFDEDFQNRVAQGIADGITEYLDVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 60534 for 1185 contacts (51.1/contact) +
2D Compatibility (PS) -15545 + (NN) 3449 + (LL) 652
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: 45240.0 ( 38.18 by residue)
QMean score : 0.110
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