Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTTEGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRE-NTKNDRGFYVPEVDWSRTSKRVLTLEWIGATPVYEVEKLNNHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDSNNSIVALDCGIMGRIDRETCYYVIEILKGFLNRDYDRVAKVHFRAGYVSPQHKSFVTACRAIGEPIIGQPIQKISFA--SLLAQLLKITGDFDMKVQTQLLLLQKTMILLEGTCRKIYPEINVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
| 4AMQ Chain:A ((22-381)) | ---RMLIFTYKLERYIKNKILPKILVVPDRDKYQIKG---------------SFRRRIPYITDI---DIVNN------------------------------VHPEYDDTNIYQRIVDLINSFTN-------------------DNQIKLIYVICGTDDRFLLTEYSDEEIEKIKILL--------------NPTELVELNNVNKKVFYINEIIWDLY-----KLRW------TSSEVLAGKKILRGGIEVSFQDVVK------------------NNSILLLQYFVKIE------YYPIGFDIAVRYKPFYQLKLANYSKEYY---FMLFPLRFYFKNDPTISKQLEYIIETKFGLYKQLLVRIDSYRTIYESGNLDLDTAKSIIISIIKDI----------------RKLNGID-MNIIDKIQEVSNNSAGQDKIIAWNTLLTQLYTNINKSVNKQSKKYFTRYINIIPKEDRKLCCL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77480 for 2442 contacts (-31.7/contact) +
2D Compatibility (PS) -35069 + (NN) -811 + (LL) 11064
1D Compatibility (HY) -16800 + (ID) 3800
Total energy: -122896.0 ( -50.33 by residue)
QMean score : 0.256
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