Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYGTTILSIRKDKSVIVIGDGQVSLGHTVIKSGAKKVRRLSSDSVIAGFAGATADAFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEP-EDGIAAIGSGGNFALSAAKALIDIKGISIEEIAKKAMKIAADICVYTNHNVVVEKIEG
1OFH Chain:H ((1-172))
---TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELFERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQILAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEELPN
General information:
TITO was launched using:
RESULT:
Template:
1OFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128900 for 1462 contacts (-88.2/contact) +
2D Compatibility (PS) -19293 + (NN) -13617 + (LL) 128
1D Compatibility (HY) -18000 + (ID) 5250
Total energy: -184932.0 ( -126.49 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1OFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OFH-query.scw
PDB file :
Tito_Scwrl_1OFH.pdb
: