Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNHKNVKKMIKAIAKRTLINKMRKSKTRTAIRKLVDIIKSGNKENVTPAFRSAESNLHKCVSKGVIHKNTAARKISRLNAKVKALMTA
1LQ7 Chain:A ((1-67))
GSRVKALEEKVKALEEKVKALG-----------------GGGRIEELKKKWEELKKKIEELGGGGEVKK--VEEEVKKLEEEIKKL---
General information:
TITO was launched using:
RESULT:
Template:
1LQ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2395 for 454 contacts (-5.3/contact) +
2D Compatibility (PS) -6937 + (NN) -596 + (LL) 2200
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -10228.0 ( -22.53 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_1LQ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LQ7-query.scw
PDB file :
Tito_Scwrl_1LQ7.pdb
: