Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGYITMETLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARACVFSGSGLITVATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDFKGNNAITFLLQNI-QPHQNLIVDGDAITIFSKLKPQ-LPTCRVIFTPHLKEWERLSGIPIEEQTYERNREAV-DRL--GATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMITSFVGQFDN-LKEAVMSATYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES |
| 3BGK Chain:A ((37-311)) | ----IDDL-LTKKIIKPRPLNSHKGTFGRVLLIGGNYPYGGAIIMAALACVNSGAGLVTVATHKDNITALHSHLPEAMAFDMVEKDRLSEQITAADVVLMGPGLAEDDLA-QTTFDVVWQAIEPKQTLIIDGSAINLLAKRK-AIWPTKQIILTPHQKEWERLSGLTIPE-QIEAATQTALAHFPKETILVAKSHQTKIYQGQKIGHIQVGGPYQATGGMGDTLAGMIAGFVAQFHTDRFEVAAAAVFLHSYIADQLSKEAYVVLPTRISAEITRVMKEMSE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184939 for 2396 contacts (-77.2/contact) +
2D Compatibility (PS) -29221 + (NN) -12799 + (LL) -92
1D Compatibility (HY) -17600 + (ID) 5700
Total energy: -250351.0 ( -104.49 by residue)
QMean score : 0.604
|
|
|