Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVIFTQDVKGKGKKGEVKEVPVGYANNFLLKKNYAVEATPGNLKQLELQKKRAKQERQQEIEDAKALKETLSNIEVEVSAKTGEGGKLFGSVSTKQIAEALKAQHDIKIDKRKMDLPNGIHSLGYTNVPVKLDKEVEGTIRVHTVEQ
2HBA Chain:A ((1-51))
MKVIFLKDVKGMGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQK-------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15832 for 315 contacts (-50.3/contact) +
2D Compatibility (PS) -5309 + (NN) -481 + (LL) 6932
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -21690.0 ( -68.86 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_2HBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HBA-query.scw
PDB file :
Tito_Scwrl_2HBA.pdb
: