Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNMSGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYNMNLNVELKGITGPNGLALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIMPQYNRAVIFHTTSFREDWRTLLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVNKPARANQLANWGVDGIFTDNADKMVHLSQ
2PZ0 Chain:A ((12-249))
-TLVIAHRGDSKNVPENTIAAFKRAME-LGADGIELDVQLTKDGHLVVIHDETVDRTTNGEGFVKDFTLEEIKKLDAGIKFGEKFAGERIPTLYEVFELIGDKDFLVNIEIKSGIVLY-----PGIEEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGL-VEPW-HMALRMEAYSLHPFYFNIIPELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGIITDDPETLINLVR
General information:
TITO was launched using:
RESULT:
Template:
2PZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77344 for 2060 contacts (-37.5/contact) +
2D Compatibility (PS) -26137 + (NN) -14258 + (LL) 928
1D Compatibility (HY) -16400 + (ID) 3700
Total energy: -136911.0 ( -66.46 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_2PZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PZ0-query.scw
PDB file :
Tito_Scwrl_2PZ0.pdb
: