Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYDDFIVGETFKTKSLHITEEEIIQFATT-FDPQYMHIDKEKAEQSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAEITNKKSIKKENGLVTVSLSTYNENEEIVFKGEVTALINNS
1S9C Chain:A ((179-289))
------------------TTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQ--FADNDVSRFKAVKARFAKPVYPGQTLQTEMWKEG--------NRIHFQTKVQ-ETGDIVISNAYVDLA---
General information:
TITO was launched using:
RESULT:
Template:
1S9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49452 for 803 contacts (-61.6/contact) +
2D Compatibility (PS) -11785 + (NN) -2436 + (LL) 1308
1D Compatibility (HY) -1200 + (ID) 1250
Total energy: -64815.0 ( -80.72 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1S9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S9C-query.scw
PDB file :
Tito_Scwrl_1S9C.pdb
: