Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------MIIYMNTIKNTIYTEAIFSKDEKHRYL------LKKTWDEKKPACTVITMYPHLDGVLSLDLTTVLILNQLANS----------------ERYGAVYLVNLFSNIKTPENLKHIKEPYDKHTDIHLMKAISESDTVILAYGAYAKRPVVVERVEQVMEMLKPHKKKVKKLINPATNEIMHPLNPKARQKWTLKA-- |
| 4MVD Chain:A ((60-315)) | GLRQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIWEEKSREFIGSFLEMFGP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11323 for 815 contacts (-13.9/contact) +
2D Compatibility (PS) -17930 + (NN) -2820 + (LL) 0
1D Compatibility (HY) -400 + (ID) 1200
Total energy: -33673.0 ( -41.32 by residue)
QMean score : 0.185
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