Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MKINRYITRGISEYLSLDLQILLWNMVKER-DNQPHTDYLHIFKLQEDENILSITHEQEQPAYKLEY-HYTNYVKNQNALPKKVYVIREDGVDAFYYVMLLPEE-Y
2R41 Chain:A ((3-104))
ERFDSDRSRYASLGVVSSLPSGLIDSIWLIIDLNLKGVIPLNDLLHFDLLNNNGKVTVHFSQENSS---VEMAIDLPFSYSTAYPSRIFAFDDGH----RETILLPAEML
General information:
TITO was launched using:
RESULT:
Template:
2R41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46583 for 615 contacts (-75.7/contact) +
2D Compatibility (PS) -10357 + (NN) -2006 + (LL) 724
1D Compatibility (HY) 0 + (ID) 650
Total energy: -58872.0 ( -95.73 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_2R41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R41-query.scw
PDB file :
Tito_Scwrl_2R41.pdb
: