Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MNNKDIYSDDFQNALVDIILNIDKINVKEVFDDSCRAVDQDNKKDTLNRSPKDFSINISDIVRYSILCMENL-SSDKIE---------ENINMIKNHSSE-LNDNDMFIQEKNNFTTNFNKFCNALGINIANFKSGKSY-----------VFKPKSLFVLYD-ILSNNSVYLHFFKNGINDKD---IDSSNRIKENLYYFINHEITDQRDYEHALTNYYLYFLVDSNIEIGIKSIIIKIFTEKGITSKDKLQILEYYLDEIDDLNTEISTKIADAHVKNSTNFL---ENEKVSINSNLAKYITHRDTRASAPKNMLLSLILNSDLVSPKDLEEKELKYPKKITK--EHHDKLIKEINKALDYYNDNNTTPSDYFYITSD---------- |
| 4GF7 Chain:A ((10-379)) | KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSS---------------ELRAFGAGIY-LWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMA---PAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMC-PALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTPAALEAARYDPLRRVYSWPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9866 for 2832 contacts (3.5/contact) +
2D Compatibility (PS) -33486 + (NN) -27 + (LL) 1260
1D Compatibility (HY) -5600 + (ID) 2650
Total energy: -30637.0 ( -10.82 by residue)
QMean score : 0.162
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