Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVF-K-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYA-GGYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNL-AGGYKSSLKLIDDLYEKLNIEKQSK |
3TNY Chain:A ((17-296)) | -----------------------------------EVVTVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSET-LRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKVNQ---EISMVR-FMPGDVRIYHGDTFSGVILKELGFKRPGDQNK----DDFAERNVSKERISAMDGDVLFYFTFDKGNE--KKGSELEKEYINDPLFKNLNAVKNGKAY-KVDDVIWNTAGGVI-AANLLLDDIEKRFV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48349 for 2318 contacts (-20.9/contact) +
2D Compatibility (PS) -29354 + (NN) -12483 + (LL) 3320
1D Compatibility (HY) -20400 + (ID) 5450
Total energy: -112716.0 ( -48.63 by residue)
QMean score : 0.549
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