Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVF-K-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYA-GGYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNL-AGGYKSSLKLIDDLYEKLNIEKQSK
3TNY Chain:A ((17-296))-----------------------------------EVVTVEHAMGKTEVPANPKRVVILTNEGTEALLELGVKPVGAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSET-LRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKVNQ---EISMVR-FMPGDVRIYHGDTFSGVILKELGFKRPGDQNK----DDFAERNVSKERISAMDGDVLFYFTFDKGNE--KKGSELEKEYINDPLFKNLNAVKNGKAY-KVDDVIWNTAGGVI-AANLLLDDIEKRFV------


General information:
TITO was launched using:
RESULT:

Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48349 for 2318 contacts (-20.9/contact) +
2D Compatibility (PS) -29354 + (NN) -12483 + (LL) 3320
1D Compatibility (HY) -20400 + (ID) 5450
Total energy: -112716.0 ( -48.63 by residue)
QMean score : 0.549

(partial model without unconserved sides chains):
PDB file : Tito_3TNY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TNY-query.scw
PDB file : Tito_Scwrl_3TNY.pdb: