Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNVEKSFIKIGLYFQIAYIVLMAITLCGFVICYGLIFGLFYLLSGSRADYLIVTIVISAIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISILGRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEIHKDEATTKVVSDNTEPPIESKGHVSKKD------ |
| 4QKW Chain:A ((3-103)) | ----------------------------------------------------------------------------------------------------------------PVSALSILSLLERVSTIIDGVQASQQRMEERQQQLEGSVSAVQS-ELLKLARDHGATATTVDKLLQKARRVSTHVKEVRSRVEKQNVRVKKVETTQDELLTR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22919 for 376 contacts (61.0/contact) +
2D Compatibility (PS) -9526 + (NN) 4818 + (LL) 12852
1D Compatibility (HY) -1600 + (ID) 650
Total energy: 28813.0 ( 76.63 by residue)
QMean score : 0.327
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